Publications

2020

Papers in international journals

  • S. van de Leemput, M. Prokop, B. van Ginneken and R. Manniesing. "Stacked Bidirectional Convolutional LSTMs for Deriving 3D Non-contrast CT from Spatiotemporal 4D CT", IEEE Transactions on Medical Imaging, 2020. Abstract/PDF DOI PMID

Theses

  • M. Meijs. "Automated Image Analysis and Machine Learning to Detect Cerebral Vascular Pathology in 4D-CTA", 2020. Abstract/PDF

2019

Papers in international journals

  • M. Meijs, S. Pegge, K. Murayama, H. Boogaarts, M. Prokop, P. Willems, R. Manniesing and F. Meijer. "Color mapping of 4D-CTA for the detection of cranial arteriovenous shunts", American Journal of Neuroradiology, 2019. Abstract/PDF DOI PMID
  • A. Patel, F. Schreuder, C. Klijn, M. Prokop, B. van Ginneken, H. Marquering, Y. Roos, M. Baharoglu, F. Meijer and R. Manniesing. "Intracerebral haemorrhage segmentation in non-contrast CT", Nature Scientific Reports, 2019. Abstract/PDF DOI PMID
  • R. Becks, R. Manniesing, J. Vister, S. Pegge, S. Steens, E. van Dijk, M. Prokop and F. Meijer. "Brain CT Perfusion Improves Intracranial Vessel Occlusion Detection on CT Angiography", Journal of Neuroradiology, 2019. Abstract/PDF DOI PMID
  • N. deSouza, E. Achten, A. Alberich-Bayarri, F. Bamberg, R. Boellaard, O. Clement, L. Fournier, F. Gallagher, X. Golay, C. Heussel, E. Jackson, R. Manniesing, M. Mayerhofer, E. Neri, J. O'Connor, K. Oguz, A. Persson, M. Smits, E. van Beek, C. Zech and E. of Radiology. "Validated imaging biomarkers as decision-making tools in clinical trials and routine practice: current status and recommendations from the EIBALL* subcommittee of the European Society of Radiology (ESR)", Insights into Imaging, 2019. Abstract/PDF DOI PMID
  • S. van de Leemput, J. Teuwen, B. van Ginneken and R. Manniesing. "MemCNN: A Python/PyTorch package for creating memory-efficient invertible neural networks", Journal of Open Source Software, 2019. Abstract/PDF DOI
  • A. Patel, S. van de Leemput, M. Prokop, B. van Ginneken and R. Manniesing. "Image Level Training and Prediction: Intracranial Hemorrhage Identification in 3D Non-Contrast CT", IEEE Access, 2019. Abstract/PDF DOI
  • S. van de Leemput, M. Meijs, A. Patel, F. Meijer, B. van Ginneken and R. Manniesing. "Multiclass Brain Tissue Segmentation in 4D CT using Convolutional Neural Networks", IEEE Access, 2019. Abstract/PDF DOI

2018

Papers in international journals

  • M. Oei, F. Meijer, J. Mordang, E. Smit, A. Idema, B. Goraj, H. Laue, M. Prokop and R. Manniesing. "Observer Variability of Reference Tissue Selection for Relative Cerebral Blood Volume Measurements in Glioma Patients", European Radiology, 2018. Abstract/PDF DOI PMID
  • M. Meijs, F. de Leeuw, H. Boogaarts, R. Manniesing and F. Meijer. "Circle of Willis collateral flow in carotid artery occlusion is depicted by 4D-CTA", World Neurosurgery, 2018. Abstract/PDF DOI PMID

Papers in conference proceedings

  • A. Patel and R. Manniesing. "A convolutional neural network for intracranial hemorrhage detection in non-contrast CT", Medical Imaging, 2018. Abstract/PDF DOI
  • K. Standvoss, T. Crijns, L. Goerke, D. Janssen, S. Kern, T. van Niedek, J. van Vugt, N. Burgos, E. Gerritse, J. Mol, D. van de Vooren, M. Ghafoorian, T. van den Heuvel and R. Manniesing. "Cerebral Microbleed Detection in Traumatic Brain Injury Patients using 3D Convolutational Neural Networks", Medical Imaging, 2018. Abstract/PDF DOI
  • S. van de Leemput, M. Prokop, B. van Ginneken and R. Manniesing. "Stacked Bidirectional Convolutional LSTMs for 3D Non-contrast CT Reconstruction from Spatiotemporal 4D CT", Medical Imaging with Deep Learning, 2018. Abstract/PDF
  • M. Ghafoorian, J. Teuwen, R. Manniesing, F. de Leeuw, B. van Ginneken, N. Karssemeijer and B. Platel. "Student Beats the Teacher: Deep Neural Networks for Lateral Ventricles Segmentation in Brain MR", Medical Imaging, 2018. Abstract/PDF DOI arXiv
  • S. van de Leemput, J. Teuwen and R. Manniesing. "MemCNN: a Framework for Developing Memory Efficient Deep Invertible Networks", International Conference on Learning Representations, 2018. Abstract/PDF
  • M. Meijs and R. Manniesing. "Artery and Vein Segmentation of the Cerebral Vasculature in 4D CT using a 3D Fully Convolutional Neural Network", Medical Imaging, 2018. Abstract/PDF DOI
  • S. van de Leemput, A. Patel and R. Manniesing. "Full Volumetric Brain Tissue Segmentation in Non-contrast CT using Memory Efficient Convolutional LSTMs", Medical Imaging meets NeurIPS, 2018. Abstract/PDF

Abstracts

  • M. Meijs, A. Patel, S. van de Leemput, B. van Ginneken, M. Prokop and R. Manniesing. "Fast, Robust and Accurate Segmentation of the Complete Cerebral Vasculature in 4D-CTA using Deep Learning", Annual Meeting of the Radiological Society of North America, 2018. Abstract/PDF
  • A. van der Eerden, T. van den Heuvel, B. Geurts, B. Platel, T. Vyveree, L. van den Hauwee, T. Andriessen, B. Goraj and R. Manniesing. "Automatic versus human detection of traumatic cerebral microbleeds on susceptibility weighted imaging", European Congress of Radiology, 2018. Abstract
  • K. Koschmieder, A. van der Eerden, B. van Ginneken and R. Manniesing. "Brain Extraction in Susceptibility-Weighted MR Images using Deep Learning", Annual Meeting of the Radiological Society of North America, 2018. Abstract/PDF
  • F. Meijer, P. Willems, M. Meijs and R. Manniesing. "Color-mapping visualization of 4D-CTA in neurovascular disease", European Society of Neuroradiology, 2018. Abstract/PDF

2017

Papers in international journals

  • M. Oei, F. Meijer, W. van der Woude, E. Smit, B. van Ginneken, R. Manniesing and M. Prokop. "Interleaving cerebral CT perfusion with neck CT angiography. Part II: clinical implementation and image quality", European Radiology, 2017. Abstract/PDF DOI PMID
  • M. Meijs, A. Patel, S. van de Leemput, M. Prokop, E. van Dijk, F. de Leeuw, F. Meijer, B. van Ginneken and R. Manniesing. "Robust Segmentation of the Full Cerebral Vasculature in 4D CT Images of Suspected Stroke Patients", Nature Scientific Reports, 2017. Abstract/PDF DOI PMID
  • R. Manniesing, M. Oei, L. Oostveen, J. Melendez, E. Smit, B. Platel, C. Sánchez, F. Meijer, M. Prokop and B. van Ginneken. "White Matter and Gray Matter Segmentation in 4D Computed Tomography", Nature Scientific Reports, 2017. Abstract/PDF DOI PMID
  • M. Oei, F. Meijer, W. van der Woude, E. Smit, B. van Ginneken, M. Prokop and R. Manniesing. "Interleaving cerebral CT perfusion with neck CT angiography part I. Proof of concept and accuracy of cerebral perfusion values", European Radiology, 2017. Abstract/PDF DOI PMID
  • A. Patel, B. van Ginneken, F. Meijer, E. van Dijk, M. Prokop and R. Manniesing. "Robust Cranial Cavity Segmentation in CT and CT Perfusion Images of Trauma and Suspected Stroke Patients", Medical Image Analysis, 2017. Abstract/PDF DOI PMID

Papers in conference proceedings

  • A. Patel, S. van de Leemput, M. Prokop, B. van Ginneken and R. Manniesing. "Automatic Cerebrospinal Fluid Segmentation in Non-Contrast CT Images Using a 3D Convolutional Network", Medical Imaging, 2017. Abstract/PDF DOI

Abstracts

  • S. van de Leemput, F. Meijer, M. Prokop and R. Manniesing. "Cerebral white matter, gray matter and cerebrospinal fluid segmentation in CT using VCAST: a volumetric cluster annotation and segmentation tool", European Congress of Radiology, 2017. Abstract
  • M. Meijs, S. Pegge, M. Prokop, B. van Ginneken, F. Meijer and R. Manniesing. "Detection of vessel occlusion in acute stroke is facilitated by color-coded 4D-CTA", European Congress of Radiology, 2017. Abstract/PDF
  • S. Pegge, M. Meijs, M. Prokop, R. Manniesing and F. Meijer. "Color-mapping of 4D-CTA for the detection and classification of cranial arteriovenous fistulas", European Society of Neuroradiology, 2017. Abstract/PDF
  • A. Patel, F. Meijer, M. Prokop, B. van Ginneken and R. Manniesing. "Robust segmentation of the cranial cavity in non-contrast CT and CT perfusion of the brain", European Congress of Radiology, 2017. Abstract

2016

Papers in international journals

  • R. Manniesing, C. Brune, B. van Ginneken and M. Prokop. "A 4D CT Digital Phantom of an Individual Human Brain for Perfusion Analysis", PeerJ, 2016. Abstract/PDF DOI PMID
  • O. Debats, M. Meijs, G. Litjens and H. Huisman. "Automated multistructure atlas-assisted detection of lymph nodes using pelvic MR lymphography in prostate cancer patients", Medical Physics, 2016. Abstract/PDF DOI PMID
  • T. van den Heuvel, A. van der Eerden, R. Manniesing, M. Ghafoorian, T. Tan, T. Andriessen, T. Vyvere, L. van den Hauwe, B. ter Romeny, B. Goraj and B. Platel. "Automated detection of cerebral microbleeds in patients with Traumatic Brain Injury", NeuroImage: Clinical, 2016. Abstract/PDF DOI PMID
  • C. de Korte, S. Fekkes, A. Nederveen, R. Manniesing and H. Hansen. "Review: Mechanical Characterization of Carotid Arteries and Atherosclerotic Plaques", IEEE Transactions on Ultrasonics Ferroelectrics and Frequency Control, 2016. Abstract/PDF DOI PMID
  • R. Manniesing, M. Oei, B. van Ginneken and M. Prokop. "Quantitative Dose Dependency Analysis of Whole-Brain CT Perfusion Imaging", Radiology, 2016. Abstract/PDF DOI PMID
  • M. Meijs, S. Christensen, M. Lansberg, G. Albers and F. Calamante. "Analysis of perfusion MRI in stroke: To deconvolve, or not to deconvolve", Magnetic Resonance in Medicine, 2016. Abstract/PDF DOI PMID
  • T. Tan, A. Gubern-Mérida, C. Borelli, R. Manniesing, J. van Zelst, L. Wang, W. Zhang, B. Platel, R. Mann and N. Karssemeijer. "Segmentation of malignant lesions in 3D breast ultrasound using a depth-dependent model", Medical Physics, 2016. Abstract/PDF DOI PMID
  • E. Lens, A. Kotte, A. Patel, H. Heerkens, M. Bal, G. van Tienhoven, A. Bel, A. van der Horst and G. Meijer. "Probabilistic treatment planning for pancreatic cancer treatment: prospective incorporation of respiratory motion shows only limited dosimetric benefit", Acta Oncologica, 2016. Abstract/PDF DOI PMID

Abstracts

  • R. Becks, M. Meijs, R. Manniesing, J. Vister, S. Schalekamp, R. Mann, S. Steens, E. Smit, E. van Dijk, M. Prokop and F. Meijer. "Additional Value of Brain CT Perfusion in The Detection of Intracranial Vessel Occlusion in Acute Ischemic Stroke: A (Multi Experience Level) Inter-Observer Study", Annual Meeting of the Radiological Society of North America, 2016. Abstract
  • M. Meijs, M. Prokop, F. Meijer, B. van Ginneken and R. Manniesing. "Segmentation of small cerebral vessels on CT perfusion images of patients with suspected acute stroke", Annual Meeting of the Radiological Society of North America, 2016. Abstract/PDF
  • R. Manniesing, S. van de Leemput, M. Prokop and B. van Ginneken. "White Matter and Gray Matter Segmentation in 4D CT Images of Acute Ischemic Stroke Patients: a Feasibility Study", Annual Meeting of the Radiological Society of North America, 2016. Abstract

2015

Papers in international journals

  • H. Kortman, E. Smit, M. Oei, R. Manniesing, M. Prokop and F. Meijer. "4D-CTA in Neurovascular Disease: A Review", American Journal of Neuroradiology, 2015. Abstract/PDF DOI PMID

Papers in conference proceedings

  • S. van de Leemput, F. Dorssers and B. Ehteshami Bejnordi. "A novel spherical shell filter for reducing false positives in automatic detection of pulmonary nodules in thoracic CT scans", Medical Imaging, 2015. Abstract/PDF DOI
  • T. van den Heuvel, M. Ghafoorian, A. van der Eerden, B. Goraj, T. Andriessen, B. ter Romeny and B. Platel. "Computer Aided Detection of Brain Micro-Bleeds in Traumatic Brain Injury", Medical Imaging, 2015. Abstract/PDF DOI
  • M. Meijs, O. Debats and H. Huisman. "The evaluation of multi-structure, multi-atlas pelvic anatomy features in a prostate MR Lymphography CAD system", Medical Imaging, 2015. Abstract/PDF DOI

2014

Papers in international journals

  • P. Ciet, P. Wielopolski, R. Manniesing, S. Lever, M. Bruijne, G. Morana, P. Muzzio, M. Lequin and H. Tiddens. "Spirometer-controlled Cine-Magnetic Resonance Imaging for Diagnosis of Tracheobronchomalacia in Pediatric Patients", European Respiratory Journal, 2014. Abstract/PDF DOI PMID
  • O. Gishti, R. Gaillard, R. Manniesing, M. Abrahamse-Berkeveld, E. van der Beek, D. Heppe, E. Steegers, A. Hofman, L. Duijts, B. Durmus and V. Jaddoe. "Fetal and infant growth patterns associated with total and abdominal fat distribution in school-age children", Journal of Clinical Endocrinology and Metabolism, 2014. Abstract/PDF DOI PMID
  • R. van den Boom, R. Manniesing, M. Oei, W. van der Woude, E. Smit, H. Laue, B. van Ginneken and M. Prokop. "A 4D Digital Phantom for Patient-Specific Simulation of Brain CT Perfusion Protocols", Medical Physics, 2014. Abstract/PDF DOI PMID
  • B. Durmus, D. Heppe, O. Gishti, R. Manniesing, M. Abrahamse-Berkeveld, E. van der Beek, A. Hofman, L. Duijts, R. Gaillard and V. Jaddoe. "General and abdominal fat outcomes in school-age children associated with infant breastfeeding patterns", American Journal of Clinical Nutrition, 2014. Abstract/PDF DOI PMID
  • B. Durmus, D. Heppe, H. Taal, R. Manniesing, H. Raat, A. Hofman, E. Steegers, R. Gaillard and V. Jaddoe. "Parental Smoking During Pregnancy and Total and Abdominal Fat Distribution in School-age Children: the Generation R Study", International Journal of Obesity, 2014. Abstract/PDF DOI PMID

Abstracts

  • M. Oei, R. Manniesing, F. Meijer and M. Prokop. "One-Step-Stroke Imaging: Does an Interleaved Acquisition of Cerebral CT Perfusion and CTA of the Carotids Affect CTP Values", European Congress of Radiology, 2014. Abstract
  • M. Oei, R. Manniesing, W. and van den Boom, B. van Ginneken, F. Meijer and M. Prokop. "One-Step-Stroke CT Imaging - Part I: Optimization of Interleaved Acquisition of Cerebral CT Perfusion and Neck CT Angiography", Annual Meeting of the Radiological Society of North America, 2014. Abstract

2013

Papers in international journals

  • A. Firouzian, R. Manniesing, C. Metz, R. Risselada, S. Klein, F. van Kooten, M. Sturkenboom, A. van der Lugt and W. Niessen. "Quantification of Intracranial Aneurysm Morphodynamics from ECG-gated CT Angiography", Academic Radiology, 2013. Abstract/PDF DOI PMID
  • R. Hameeteman, S. Rozie, C. Metz, R. Manniesing, T. van Walsum, A. van der Lugt, W. Niessen and S. Klein. "Automated Carotid Artery Distensibility Measurements from CTA using Nonrigid Registration", Medical Image Analysis, 2013. Abstract/PDF DOI PMID

Papers in conference proceedings

  • J. Mordang, M. Oei, R. van den Boom, E. Smit, M. Prokop, B. van Ginneken and R. Manniesing. "A Pattern Recognition Framework for Vessel Segmentation in 4D CT of the Brain", Medical Imaging, 2013. Abstract/PDF DOI
  • H. Laue, M. Oei, L. Chen, I. Kompan, H. Hahn, M. Prokop and R. Manniesing. "Automated Artery and Vein Detection in Dynamic CT data with an Unsupervised Classification Algorithm of the Time Intensity Curves", Medical Imaging, 2013. Abstract/PDF DOI
  • A. van der Avoird, N. Lin, B. van Ginneken and R. Manniesing. "A Hardware Implementation of a Levelset Algorithm for Carotid Lumen Segmentation in CTA", Medical Imaging, 2013. Abstract/PDF DOI

Abstracts

  • M. Oei, R. van den Boom, L. Oostveen, H. Laue, B. van Ginneken, R. Manniesing and M. Prokop. "Influence of Temporal Sampling Rate of CTP acquisitions on Cerebral Perfusion Maps using a Digital Phantom", European Congress of Radiology, 2013. Abstract
  • R. van den Boom, M. Oei, L. Oostveen, H. Laue, A. van Ginneken, R. Manniesing and M. Prokop. "Effect of dose reduction on cerebral CT perfusion maps: results from a hybrid digital perfusion phantom", European Congress of Radiology, 2013. Abstract

Theses

  • A. Firouzian. "Automated Analysis of Intracranial Aneurysm Morphology and Dynamics from CTA Data", 2013. Abstract/PDF

2012

Papers in international journals

  • D. Vukadinovic, S. Rozie, M. van Gils, T. van Walsum, R. Manniesing, A. van der Lugt and W. Niessen. "Automated versus manual segmentation of atherosclerotic carotid plaque volume and components in CTA: associations with cardiovascular risk factors", International Journal of Cardiovascular Imaging, 2012. Abstract/PDF DOI PMID

Papers in conference proceedings

  • R. van den Boom, M. Oei, S. Lafebre, L. Oostveen, A. Meijer, S. Steens, M. Prokop, B. van Ginneken and R. Manniesing. "Brain Tissue Segmentation in 4D CT Images Using Voxel Classification", Medical Imaging, 2012. Abstract/PDF DOI
  • A. Firouzian, R. Manniesing, C. Metz, S. Klein, B. Velthuis, G. Rinkel, A. van der Lugt and W. Niessen. "Intracranial aneurysm growth quantification on CTA", Medical Imaging, 2012. Abstract/PDF DOI
  • M. Koek, F. Goncalves, D. Poldermans, W. Niessen and R. Manniesing. "Semi-Automated Subcutaneous and Visceral Adipose Tissue Quantification in Computed Tomography", MICCAI Workshop on Computational and Clinical Applications in Abdominal Imaging, 2012. Abstract/PDF DOI

Abstracts

  • B. Durmus, R. Gaillard, R. Manniesing, D. Heppe, A. Hofman and V. Jaddoe. "Maternal Smoking During Pregnancy and Adiposity in School Age Children: The Generation R Study", International Society for Development Origins of Health and Disease, 2012. Abstract
  • M. Oei, R. van den Boom, L. Oostveen, S. Lafebre, E. Smit, B. van Ginneken, R. Manniesing and M. Prokop. "Hybrid digital phantom for optimizing data acquisition strategies in CT perfusion", European Congress of Radiology, 2012. Abstract
  • J. Mordang, M. Oei, R. van den Boom, H. Laue, L. Oostveen, M. Prokop, B. van Ginneken and R. Manniesing. "Effect of Dose Reduction in CT Perfusion Scans on Cerebral Blood Flow and Volume Computed with Three Perfusion Software Packages: Analysis with a Digital Phantom", Annual Meeting of the Radiological Society of North America, 2012. Abstract
  • R. van den Boom, M. Oei, L. Oostveen, S. Lafebre, B. van Ginneken, R. Manniesing and M. Prokop. "Effect of radiation exposure on quantitative evaluation of cerebral CT perfusion maps: results from a hybrid digital phantom", European Congress of Radiology, 2012. Abstract

2011

Papers in international journals

  • A. Rosenkrantz, M. Oei, J. Babb, B. Niver and B. Taouli. "Diffusion-weighted imaging of the abdomen at 3.0 Tesla: image quality and apparent diffusion coefficient reproducibility compared with 1.5 Tesla", Journal of Magnetic Resonance Imaging, 2011. Abstract/PDF DOI PMID
  • A. Firouzian, R. Manniesing, H. Flach, R. Risselada, F. van Kooten, M. Sturkenboom, A. van der Lugt and W. Niessen. "Intracranial Aneurysm Segmentation in 3D CT Angiography: Method and Quantitative Validation with and without Prior Noise Filtering", European Journal of Radiology, 2011. Abstract/PDF DOI PMID

Papers in conference proceedings

  • D. Vukadinovic, T. van Walsum, R. Manniesing, S. Rozie, A. van der Lugt and W. Niessen. "Region Based Level Set Segmentation of the Outer Wall of the Carotid Bifurcation in CTA", Medical Imaging, 2011. Abstract/PDF DOI

Abstracts

  • P. Ciet, P. Wielopolski, S. Lever, R. Manniesing, M. de Bruijne, M. Lequin and H. Tiddens. "MRI Tracheomalacia Assessment in Pediatric Patients: Feasibility Study", European Congress of Radiology, 2011. Abstract/PDF
  • M. Oei, B. Goraj, F. Meijer, J. Mordang, A. Idema, S. Boots-Sprenger, H. Laue and M.Prokop. "Variability of relative cerebral blood volume normalization in patients with gliomas: Interobserver and intraobserver reproducibility study", Annual Meeting of the International Society for Magnetic Resonance in Medicine, 2011. Abstract
  • P. Wielopolski, P. Ciet, R. Manniesing, S. Lever, M. Lequin, G. Krestin and H. Tiddens. "Automated Airway Lumen Segmentation and Characterization in Patients with Tracheomalacia: a Feasibility Study", Annual Meeting of the International Society for Magnetic Resonance in Medicine, 2011. Abstract/PDF

2010

Papers in international journals

  • D. Vukadinovic, T. van Walsum, R. Manniesing, S. Rozie, R. Hameeteman, T. de Weert, A. van der Lugt and W. Niessen. "Segmentation of the outer vessel wall of the common carotid artery in CTA", IEEE Transactions on Medical Imaging, 2010. Abstract/PDF DOI PMID
  • J. Patel, E. Sigmund, H. Rusinek, M. Oei, J. Babb and B. Taouli. "Diagnosis of cirrhosis with intravoxel incoherent motion diffusion MRI and dynamic contrast-enhanced MRI alone and in combination: preliminary experience", Journal of Magnetic Resonance Imaging, 2010. Abstract/PDF DOI PMID
  • R. Manniesing, M. Schaap, S. Rozie, R. Hameeteman, D. Vukadinovic, A. van der Lugt and W. Niessen. "Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population", Medical Image Analysis, 2010. Abstract/PDF DOI PMID

Papers in conference proceedings

  • A. Firouzian, R. Manniesing, H. Flach, R. Risselada, F. van Kooten, M. Sturkenboom, A. van der Lugt and W. Niessen. "Intracranial Aneurysm Segmentation in 3D CT Angiography: Method and Quantitative Validation", Medical Imaging, 2010. Abstract/PDF DOI

Abstracts

  • R. Manniesing, M. Koek, D. Goei, J. Hermans, W. Niessen and D. Poldermans. "Fully Automated Abdominal Fat Quantification using 3D Computed Tomography Angiography", European Congress of Radiology, 2010. Abstract/PDF
  • J. van Kuijk, R. Manniesing, D. Goei, Y. van Gestel, S. Hoeks, M. Koek, J. Hermans, W. Niessen, H. Verhagen and D. Poldermans. "Automatic Quantication of Abdominal Visceral Fat Content: a True Marker for Metabolic Syndrome?", European Society of Cardiology, 2010. Abstract/PDF
  • P. Wielopolski, P. Ciet, G. Krestin, M. Lequin, H. Tiddens and R. Manniesing. "Automated airway lumen segmentation and characterization for use in patients with tracheomalacya: a feasibility study", Annual Meeting of the International Society for Magnetic Resonance in Medicine, 2010. Abstract/PDF

2009

Papers in international journals

  • E. Rollano-Hijarrubia, R. Manniesing and W. Niessen. "Selective deblurring for improved calcification visualization and quantification in carotid CT angiography: validation using micro-CT", IEEE Transactions on Medical Imaging, 2009. Abstract/PDF DOI PMID
  • D. Mook-Kanamori, S. Holzhauer, L. Hollestein, B. Durmus, R. Manniesing, M. Koek, G. Boehm, E. van der Beek, A. Hofman, J. Witteman, M. Lequin and V. Jaddoe. "Abdominal fat in children measured by ultrasound and computed tomography", Ultrasound in Medicine and Biology, 2009. Abstract/PDF DOI PMID

Papers in conference proceedings

  • D. Vukadinovic, T. van Walsum, S. Rozie, T. de Weert, R. Manniesing, A. van der Lugt and W. Niessen. "Carotid artery segmentation and plaque quantification in CTA", Proc. IEEE Int. Symp. Biomedical Imaging: From Nano to Macro ISBI '09, 2009. Abstract/PDF DOI

Abstracts

  • R. Manniesing, D. Vukadinovic, S. Rozie, M. Schaap, A. van der Lugt and W. Niessen. "Automated CTA Lumen Segmentation of the Atherosclerotic Carotid Artery Bifurcation", Annual Meeting of the Radiological Society of North America, 2009. Abstract/PDF
  • D. Vukadinovic, T. van Walsum, R. Manniesing, S. Rozie, T. de Weert, A. van der Lugt and W. Niessen. "Automated Segmentation of Atherosclerotic Plaque in MDCT Angiogaphy of the Carotid Artery", 2nd Dutch Conference on Biomedical Engineering, 2009. Abstract/PDF

2008

Papers in international journals

  • P. Koopmans, R. Manniesing, W. Niessen, M. Viergever and M. Barth. "MR venography of the human brain using susceptibility weighted imaging at very high field strength", Magnetic Resonance Materials in Physics, Biology and Medicine, 2008. Abstract/PDF DOI PMID
  • R. Manniesing, M. Viergever, A. van der Lugt and W. Niessen. "Cerebral arteries: fully automated segmentation from CT angiography--a feasibility study", Radiology, 2008. Abstract/PDF DOI PMID

Papers in conference proceedings

  • D. Vukadinovic, T. van Walsum, R. Manniesing, A. van der Lugt, T. de Weert and W. Niessen. "AdaBoost Classification for Model Based Segmentation of the Outer Vessel Wall", Medical Imaging, 2008. Abstract/PDF DOI

Abstracts

  • A. Firouzian, R. Manniesing, A. van der Lugt, H. Flach and W. Niessen. "Intracranial Aneurysm Segmentation in CTA: Method and Quantitative Validation", Annual Meeting of the Radiological Society of North America, 2008. Abstract/PDF
  • P. Koopmans, R. Manniesing, W. Niessen, M. Viergever and M. Barth. "Vein Classification using Vesselness Filters on SWI Data Acquired at 3T and 7T", Annual Meeting of the International Society for Magnetic Resonance in Medicine, 2008. Abstract/PDF

2007

Papers in international journals

  • R. Manniesing, M. Viergever and W. Niessen. "Vessel axis tracking using topology constrained surface evolution", IEEE Transactions on Medical Imaging, 2007. Abstract/PDF DOI PMID

Papers in conference proceedings

  • M. Schaap, R. Manniesing, I. Smal, T. van Walsum, A. van der Lugt and W. Niessen. "Bayesian tracking of tubular structures and its application to carotid arteries in CTA", Medical Image Computing and Computer-Assisted Intervention, 2007. Abstract/PDF DOI PMID
  • R. Manniesing and W. Niessen. "Automatic Segmentation of the Internal Carotid Arteries through the Skull Base", Medical Imaging, 2007. Abstract/PDF DOI

2006

Papers in international journals

  • R. Manniesing, B. Velthuis, M. van Leeuwen, I. van der Schaaf, P. van Laar and W. Niessen. "Level set based cerebral vasculature segmentation and diameter quantification in CT angiography", Medical Image Analysis, 2006. Abstract/PDF DOI PMID
  • R. Manniesing, M. Viergever and W. Niessen. "Vessel enhancing diffusion: a scale space representation of vessel structures", Medical Image Analysis, 2006. Abstract/PDF DOI PMID

Papers in conference proceedings

  • R. Manniesing and W. Niessen. "Shape Constrained Vessel Centerline Extraction by Integrating Surface Evolution and Topology Analysis", IEEE International Symposium on Biomedical Imaging, 2006. Abstract/PDF DOI

Abstracts

  • R. Manniesing and W. Niessen. "Automated Detection of the Internal Carotid Arteries in Multislice Cerebral CT Angiography", Annual Meeting of the Radiological Society of North America, 2006. Abstract/PDF
  • P. Koopmans, R. Manniesing, D. Norris, M. Viergever and M. Barth. "Vein Segmentation from 3D High Resolution MR Venograms by Using Vessel Enhancing Diffusion", European Society for Magnetic Resonance in Medicine and Biology, 2006. Abstract/PDF

Theses

  • R. Manniesing. "Image Analysis in CT Angiography", 2006. Abstract/PDF

2005

Papers in conference proceedings

  • R. Manniesing and W. Niessen. "Multiscale vessel enhancing diffusion in CT angiography noise filtering", Information Processing in Medical Imaging, 2005. Abstract/PDF DOI PMID

2004

Papers in international journals

  • R. Manniesing, R. Kleihorst, A. van der Avoird and E. Hendriks. "Power analysis of a general convolution algorithm mapped on a linear processor array", Journal of {VLSI} Signal Processing Systems, 2004. Abstract/PDF DOI

Papers in conference proceedings

  • R. Manniesing, B. Velthuis, M. van Leeuwen and W. Niessen. "Skeletonization for re-initialization in level set-based vascular tree segmentation", Medical Imaging, 2004. Abstract/PDF DOI
  • R. Manniesing and W. Niessen. "Local Speed Functions in Level Set Based Vessel Segmentation", Medical Image Computing and Computer-Assisted Intervention, 2004. Abstract/PDF DOI

2000

Papers in conference proceedings

  • R. Manniesing, I. Karkowski and H. Corporaal. "Automatic SIMD Parallelization of Embedded Applications Based on Pattern Recognition", Sixth International Euro-Par Conference on Parallel Processing, 2000. Abstract/PDF DOI

1999

Papers in conference proceedings

  • R. Manniesing, I. Karkowski and H.Corporaal. "Evaluation of a Potential for Automatic SIMD Parallelization of Embedded Applications", Fifth Annual Conference of the Advanced School for Computing and Imaging, 1999. Abstract/PDF

Theses

  • R. Manniesing. "Power Analysis of a General Convolution Algorithm mapped on a Linear Processor Array", 1999. Abstract/PDF

1998

Papers in conference proceedings

  • R. Manniesing, R. Kleihorst, R. van der Vleuten and E. Hendriks. "Implementation of Lossless Coding for Embedded Compression", IEEE} Program for Research on Integrated Systems and Circuits/Workshop on Circuits, Systems and Signal Processing, 1998. Abstract/PDF